Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887502.1_cds_XP_016441915.1_37232
CDS Infomation

[gene=LOC107767420] [db_xref=GeneID:107767420] [protein=paramyosin-like] [protein_id=XP_016441915.1] [location=join(18739..19017,19146..19232,19983..21338)] [gbkey=CDS]
Sequence

ATGAACTCATTAAAATCACCTTCCCTGCAGAAAGATAATTCGAACTACAAGTTTATGCAA
ACAAAGGGCTCTAATAAAAATAAAGACTTGTCAGTTTCAGCAAGAAAACTGGCGGCCACT
CTCCGGGAAATTAATGGGGTTGCTGCTTCTAAAGTGAATGAGGATTTGGAGGAAAAGAAT
GATGTTGAATTGGTTAAAAAAGAAAGAATTTTGAAGTCATCTAAATTGGGTTCAGTAGCT
CTGCAATTCTCTGATCCGTTTCATGCCCCTGTTTCTGAGAGAATGGAGCGATCCGAAGTG
GGTAGTCATAGAAGAAGAAAACTTATGAAGGCTGATTTTTGTCTCCAAAATGGTTGCTTT
ATGGAGCTTGATCAGACACAAAATCACGCACAAACTCTAAGCAGAGAACGGTTGAAGGAT
GTTTATAATGGCCTTACCACATCTAAAGAGCTGTTGCATGTTCTGAGTCATGTCTGGAAT
CTCGAACAGCAGAAATCTACATGTTTATCCCTTTTCTCATCTATAAAAACTGAGCTTGAC
CAGTTGTGTAATCAGGTGTCTAAACTGATACATGAACACAAATATAACCACAGTGAAGTT
GATATCCTCTTGAAGAAGTTTGAAGAAGAAAAGATGGCCTGGAAGATAAAAGAGCAAGAC
AACATTCATACTGCCATTACATCCGTAGCGAGGGAGCTCAAGATAGAAAAGAAGCTGAGG
AACCAAACTGAGAGATTAAATAAGAAGCTTGGTAGAGAATTGGCGGATACAAAGGCATCT
CTTTCGAAGGCAGTTAAAGAGCTTGAAGGCGAGAAGAAGGACAGAGAGATATTGGAGCAA
GTCTGTGAAGAATTAGCCAGAGGTCTCGGAGAAGATAGAGCTGAGGTGGAAGAATTGAAG
AGACAATCTGCTAAAATTAGTGAAGAGGTGGAGATGGAACGGAAAATGCTTCAACTAGCT
GATGTGATGCGCGAGGAAAGAGTTCAAATAAAGCTTTTAGATGCCAAGTATCAATTTGAG
GAGAAACATGCAGTTGTTGATAAGTTAAGGAATGAACTTGAAGCCTATTTGAGATCCAAA
AAGGGCCACGAACAAGGCGGTGATTCGCATAATTTTGAAACGATCAATGAGCTCGAGAGA
TGTTTGAGAGAAACACTTCTAAGCACATACCATTACCAAGATAAAGAAAAGGCAGATGGA
GAAGTACTCAATAAGGAAGAGAATGGAGACAAGGATGATTCAGCTGATAGCGATCTTCAT
TCCATTGAATTAAATATGGGTGATAATGGCAAGAGCTATCAATGGTGCACTGCTTTACAG
AATGATACAGAATTTTCTATTTCTGATAAGAATAAAGAGAGGAGGTCCATCTCGGAGAAA
TTCCCAAGACAAAGCATTTCCTTAGGAAGGGAAACTTCAGATGGCATAGAGTGGGAATTC
TCCGTGGGAGAGAAAGAAAATGTGAACACTTTGGATAGAAGAATCTCAAATTTTCATAAC
AATGGAGGAATACTAAACTTCTCTTCTCAAGCATGGAAAAAGGATTGTGGAGATGAGATC
GAGAGATATAAAATGATCAAGGATCTTCGAGATCATATTGTTTCTGCTTCAAGAATAACA
TCTTCTCAAGACTTTTCTAGTCCAACCGAGAATTGGAGTCAGCAGAGATTTTCTTTCGAT
GATCCTAACAAAGTGACGGGCAAGGGCTTTTCCGTCTTGTAG

Peptide Sequence

PEP ID

XP_016441915.1
PEP Infomation

PREDICTED: paramyosin-like [Nicotiana tabacum]
Sequence

MNSLKSPSLQKDNSNYKFMQTKGSNKNKDLSVSARKLAATLREINGVAASKVNEDLEEKN
DVELVKKERILKSSKLGSVALQFSDPFHAPVSERMERSEVGSHRRRKLMKADFCLQNGCF
MELDQTQNHAQTLSRERLKDVYNGLTTSKELLHVLSHVWNLEQQKSTCLSLFSSIKTELD
QLCNQVSKLIHEHKYNHSEVDILLKKFEEEKMAWKIKEQDNIHTAITSVARELKIEKKLR
NQTERLNKKLGRELADTKASLSKAVKELEGEKKDREILEQVCEELARGLGEDRAEVEELK
RQSAKISEEVEMERKMLQLADVMREERVQIKLLDAKYQFEEKHAVVDKLRNELEAYLRSK
KGHEQGGDSHNFETINELERCLRETLLSTYHYQDKEKADGEVLNKEENGDKDDSADSDLH
SIELNMGDNGKSYQWCTALQNDTEFSISDKNKERRSISEKFPRQSISLGRETSDGIEWEF
SVGEKENVNTLDRRISNFHNNGGILNFSSQAWKKDCGDEIERYKMIKDLRDHIVSASRIT
SSQDFSSPTENWSQQRFSFDDPNKVTGKGFSVL

Transcript Sequence

Gene sequence data has not been registered.